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Published Research

Roche NimbleGen array technology has helped power the research behind 100+ peer-reviewed publications. Search our publication list to learn more about our technology and the science it supports.

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Genome-scale reconstruction of the Lrp regulatory network in Escherichia coli.

Cho B
, Barrett CL, Knight EM, Park YS, and Palsson BØ.
Proceedings of the National Academy of Sciences of the United States of America
 105 (49), 19462-19467.
9 Dec 2008
ChIP-chip

The MSL3 chromodomain directs a key targeting step for dosage compensation of the Drosophila melanogaster X chromosome.

Sural TH
, Peng S, Li B, Workman JL, Park PJ, and Kuroda MI.
Nature structural & molecular biology
 15 (12), 1318-1325.
Dec 2008
ChIP-chip

N-Myc regulates a widespread euchromatic program in the human genome partially independent of its role as a classical transcription factor.

Cotterman R
, Jin VX, Krig SR, Lemen JM, Wey A, Farnham PJ, and Knoepfler PS.
Cancer research
 68 (23), 9654-9662.
1 Dec 2008
ChIP-chip

Spectrum of mutational events in the absence of DOG-1/FANCJ in Caenorhabditis elegans.

Zhao Y
, Tarailo-Graovac M, O'Neil NJ, and Rose AM.
DNA repair
 7 (11), 1846-1854.
1 Nov 2008
CGH/CNV

Gene expression profile for ectopic versus eutopic endometrium provides new insights into endometriosis oncogenic potential.

Borghese B
, Mondon F, Noël J, Fayt I, Mignot T, Vaiman D, and Chapron C.
Molecular endocrinology (Baltimore, Md.)
 22 (11), 2557-2562.
Nov 2008
Gene Expression

A sequence motif within chromatin entry sites directs MSL establishment on the Drosophila X chromosome.

Alekseyenko AA
, Peng S, Larschan E, Gorchakov AA, Lee O, Kharchenko P, McGrath SD, Wang CI, Mardis ER, Park PJ, and Kuroda MI.
Cell
 134 (4), 599-609.
22 Aug 2008
ChIP-chip

Mutagenic capacity of endogenous G4 DNA underlies genome instability in FANCJ-defective C. elegans.

Kruisselbrink E
, Guryev V, Brouwer K, Pontier DB, Cuppen E, and Tijsterman M.
Current biology : CB
 18 (12), 900-905.
24 Jun 2008
CGH/CNV

Genome-wide analysis of Fis binding in Escherichia coli indicates a causative role for A-/AT-tracts.

Cho B
, Knight EM, Barrett CL, and Palsson BØ.
Genome research
 18 (6), 900-910.
Jun 2008
ChIP-chip

Mouse segmental duplication and copy number variation.

She X
, Cheng Z, Zollner S, Church D, and Eichler E.
Nature Genetics
 advanced online publication (7), 909-914.
22 May 2008
CGH/CNV

SALL4 is a key regulator of survival and apoptosis in human leukemic cells.

Yang J
, Chai L, Gao C, Fowles TC, Alipio Z, Dang H, Xu D, Fink LM, Ward DC, and Ma Y.
Blood
 112 (3), 805-813.
16 May 2008
ChIP-chip

Gene Expression