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Published Research

Roche NimbleGen array technology has helped power the research behind 100+ peer-reviewed publications. Search our publication list to learn more about our technology and the science it supports.

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Probing genomic diversity and evolution of Escherichia coli O157 by single nucleotide polymorphisms.

Zhang W
, Qi W, Albert TJ, Motiwala AS, Alland D, Hyytia-Trees EK, Ribot EM, Fields PI, Whittam TS, and Swaminathan B.
Genome research.
 16 (6), 757-767.
Jun 2006
CGS

Molecular genetic anatomy of inter- and intraserotype variation in the human bacterial pathogen group A Streptococcus.

Beres SB
, Richter EW, Nagiec MJ, Sumby P, Porcella SF, DeLeo FR, and Musser JM.
Proceedings of the National Academy of Sciences of the United States of America
 103 (18), 7059-7064.
2 May 2006
CGS

Expression profiling by whole-genome interspecies microarray hybridization reveals differential gene expression in procyclic promastigotes, lesion-derived amastigotes, and axenic amastigotes in Leishmania mexicana.

Holzer TR
, McMaster WR, and Forney JD.
Molecular and biochemical parasitology
 146 (2), 198-218.
Apr 2006
Gene Expression

High-resolution ChIP-chip analysis reveals that the Drosophila MSL complex selectively identifies active genes on the male X chromosome.

Alekseyenko A
, Larschan E, Lai W, Park P, and Kuroda M.
Genes and Development
 20 (7), 848-857.
1 Apr 2006
ChIP-chip

Chromosome-wide gene-specific targeting of the Drosophila dosage compensation complex.

Gilfillan G
, Straub T, de Wit E, Greil F, Lamm R, van Steensel B, and Becker P.
Genes and Development
 20 (7), 858-870.
1 Apr 2006
ChIP-chip

A transcriptome-based characterization of habituation in plant tissue culture.

Pischke MS
, Huttlin EL, Hegeman AD, and Sussman MR.
Plant physiology
 140 (4), 1255-1278.
Apr 2006
Gene Expression

Global identification of noncoding RNAs in Saccharomyces cerevisiae by modulating an essential RNA processing pathway.

Samanta MP
, Tongprasit W, Sethi H, Chin C, and Stolc V.
Proceedings of the National Academy of Sciences of the United States of America
 103 (11), 4192-4197.
14 Mar 2006
Gene Expression

Defining the sequence-recognition profile of DNA-binding molecules.

Warren CL
, Kratochvil NCS, Hauschild KE, Foister S, Brezinski ML, Dervan PB, Phillips JGN, and Ansari AZ.
Proceedings of the National Academy of Sciences of the United States of America
 103 (4), 867-872.
24 Jan 2006
Other

Identification of a nitroimidazo-oxazine-specific protein involved in PA-824 resistance in Mycobacterium tuberculosis.

Manjunatha UH
, Boshoff H, Dowd CS, Zhang L, Albert TJ, Norton JE, Daniels L, Dick T, Pang SS, and Barry 3CE.
Proceedings of the National Academy of Sciences of the United States of America
 103 (2), 431-436.
10 Jan 2006
CGS

Genome-wide transcription analyses in rice using tiling microarrays.

Li L
, Wang X, Stolc V, Li X, Zhang D, Su N, Tongprasit W, Li S, Cheng Z, Wang J, and Deng XW.
Nature genetics
 38 (1), 124-129.
Jan 2006
Gene Expression