Published Research

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Exome sequencing identifies recurrent somatic RAC1 mutations in melanoma.

Krauthammer M
, Kong Y, Ha BH, Evans P, Bacchiocchi A, McCusker JP, Cheng E, Davis MJ, Goh G, Choi M, Ariyan S, Narayan D, Dutton-Regester K, Capatana A, Holman EC, Bosenberg M, Sznol M, Kluger HM, Brash DE, Stern DF, Materin MA, Lo RS, Mane S, Ma S, Kidd KK, Hayward NK, Lifton RP, Schlessinger J, Boggon TJ, and Halaban R.
Nature genetics
 44 (9), 1006-1014.
Sep 2012
Sequence Capture

Gene Expression

TIF1gamma controls erythroid cell fate by regulating transcription elongation.

Bai X
, Kim J, Yang Z, Jurynec MJ, Akie TE, Lee J, LeBlanc J, Sessa A, Jiang H, DiBiase A, Zhou Y, Grunwald DJ, Lin S, Cantor AB, Orkin SH, and Zon LI.
Cell
 142 (1), 133-143.
9 Jul 2010
Gene Expression

The Wnt receptor, Lrp5, is expressed by mouse mammary stem cells and is required to maintain the basal lineage.

Badders NM
, Goel S, Clark RJ, Klos KS, Kim S, Bafico A, Lindvall C, Williams BO, and Alexander CM.
PloS one
 4 (8), e6594.
2009
Gene Expression

mosR, a novel transcriptional regulator of hypoxia and virulence in Mycobacterium tuberculosis.

Abomoelak B
, Hoye EA, Chi J, Marcus SA, Laval F, Bannantine JP, Ward SK, Daffé M, Liu HD, and Talaat AM.
Journal of bacteriology
 191 (19), 5941-5952.
Oct 2009
Gene Expression

PpoR is a conserved unpaired LuxR solo of Pseudomonas putida which binds N-acyl homoserine lactones.

Subramoni S
, and Venturi V.
BMC microbiology
 9, 125.
17 Jun 2009
Gene Expression

Global expression analysis of the brown alga Ectocarpus siliculosus (Phaeophyceae) reveals large-scale reprogramming of the transcriptome in response to abiotic stress.

Dittami S
, Scornet D, Petit J, Ségurens B, da Silva C, Corre E, Dondrup M, Glatting K, König R, Sterck L, Rouzé P, van de Peer Y, Cock J, Boyen C, and Tonon T.
Genome biology
 10 (6), R66.
16 Jun 2009
Gene Expression

Genome-wide screen of promoter methylation identifies novel markers in melanoma.

Koga Y
, Pelizzola M, Cheng E, Krauthammer M, Sznol M, Ariyan S, Narayan D, Molinaro A, Halaban R, and Weissman S.
Genome Research
 19 (8), 1462-1470.
2 Jun 2009
DNA Methylation

Gene Expression

The cytokinin type-B response regulator PtRR13 is a negative regulator of adventitious root development in Populus.

Ramírez-Carvajal GA
, Morse AM, Dervinis C, and Davis JM.
Plant physiology
 150 (2), 759-771.
Jun 2009
Gene Expression

Proteomic and transcriptomic analyses reveal genes upregulated by cis-dichloroethene in Polaromonas sp. strain JS666.

Jennings LK
, Chartrand MMG, Lacrampe-Couloume G, Lollar BS, Spain JC, and Gossett JM.
Applied and environmental microbiology
 75 (11), 3733-3744.
Jun 2009
Gene Expression

MIKC* MADS domain heterodimers are required for pollen maturation and tube growth in Arabidopsis.

Adamczyk BJ
, and Fernandez DE.
Plant physiology
 149 (4), 1713-1723.
Apr 2009
Gene Expression

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