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Software - Partner Solutions Roche NimbleGen, Inc. has partnered with Software vendors specializing in the development of data analysis tools in the Life Sciences industry. Data generated from Roche NimbleGen’s high-density microarray platform and analyzed by Roche NimbleGen’s NimbleScan software is compatible with a number of downstream analysis software packages developed by these vendors. These solutions from our partners are designed to extend the capabilities of the NimbleGen microarray platform for scientists and researchers in the fields of genomics and genetics. All sales and support questions regarding these products should be directed to the respective vendors. Roche NimbleGen, Inc. is not responsible for providing any end-user support for these products. BioDiscovery, Inc.’s Nexus Copy Number software provides an easy-to-use interface and analysis of data from multiple samples generated from Roche NimbleGen’s high-density array CGH products. Designed for the end-user, Nexus Copy Number quickly and accurately identifies common regions of gain or loss, groups samples by aberration profiles, allows comparisons across subsets, identifies genes and biological processes affected, and integrates gene expression data with copy number changes with a few mouse clicks. Nexus Copy Number also integrates information from known CNVs with your CGH results and provides direct access to external genome websites such as UCSC, Ensemble, NCBI etc.
ArrayStar® software from DNASTAR, Inc. enables scientists and researchers to open and analyze normalized data (.call, .calls and .txt files) generated from Roche NimbleGen’s Expression arrays. ArrayStar v2.1 contains a wide range of analytical and visualization tools that will assist researchers in interpreting results obtained from gene expression experiments. A trial version of ArrayStar software is provided by DNASTAR free of charge for 15 days to Roche NimbleGen service and delivery customers. You can request a copy of the trial software by going to http://nimblegen.dnastar.com/forms/demo_requestnimble.php
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