Human DNA Methylation Promoter Arrays
The Human DNA Methylation 2.1M Deluxe Promoter is a single array design containing expanded promoter regions for all known and alternative transcript start sites. CPG Island Plus Promoter arrays cover the annotated CpG islands as well as the promoters of the well characterized RefSeq genes derived from the UCSC RefFlat files. The 3x720K CpG Island Plus RefSeq Promoter is a multiplex design with three identical arrays per slide. The Human DNA Methylation 385K Promoter - 2 Array Set contains all annotated splice variants and alternative transcription start sites. Human DNA Methylation 385K RefSeq Promoters are single array designs containing all known well-characterized RefSeq genes. The Human DNA Methylation 385K RefSeq XM Promoter is a single array design containing model reference sequences produced by NCBI's Genome Annotation Project (those accessions beginning with XM) that are predicted by genome sequence analysis.
Learn | Literature
- NEW! NimbleGen ChIP-chip & DNA Methylation Microarrays
Brochure (PDF Format 6MB) - NimbleGen ChIP-chip 2.1M Whole-Genome Tiling and Deluxe Promoter Array Delivery
Datasheet (PDF Format 419KB) - Guide to Identifying Motifs from Your ChIP-chip Data
CEAS User’s Guide (PDF Format 108KB)
Find out more about CEAS... - Guide to Functionally Annotating Your ChIP-chip Data
DAVID User’s Guide (PDF Format 274KB)
Find our more about DAVID... - 385K HG18 Tiled Promoters
List of HG18 genes whose promoters are tiled on 385K Promoter Arrays (Excel Format 13.2MB) - 385K MM8 Tiled Promoters
List of MM8 genes whose promoters are tiled on 385K Promoter Arrays (Excel Format 11.3MB)
Learn | Webinars
Dr. Andrew Sharp
Methylation Profiling in Uniparental Tissues Identifies Novel Imprinted Genes
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View Flash MovieDr. Ken Lo
Introducing the NimbleGen ChIP-chip and DNA Methylation Multiplex Arrays
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View Flash MovieDr. A. Leonardo Iniguez
Introducing the High-Resolution, High-Sensitivity NimbleGen 2.1M DNA Methylation Arrays
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Learn | Publications
- Aug 2009 | Genome Res
Genome-wide screen of promoter methylation identifies novel markers in melanoma. - Mar 2009 | Development
The non-methylated DNA-binding function of Kaiso is not required in early Xenopus laevis development. - Feb 2009 | Nat Genet
The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores. - May 2008 | PLoS One
A functional gene array for detection of bacterial virulence elements.
