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Roche NimbleGen’s broad range of eukaryotic arrays represent the latest builds for human and model genomes, including rat, mouse, zebrafish, Drosophila, C. elegans, yeast, and more. Many designs are available in both single and multiplex design formats, allowing for both genome-wide probe coverage and high-throughput analysis.
Array Specs 
| Array Format |
385K |
4x72K |
12x135K |
| Number of Arrays per Slide |
1 |
4 |
12 |
| Total Number of Probes |
385,000 |
4 x
72,000 |
12 x
135,000 |
| Probe Length |
60mer |
60mer |
60mer |
| Number of Probes per Target* |
6 - 20 |
2 - 7 |
3 - 12 |
| Number of Replicate Probe Sets per Array* |
1 - 4 |
1 |
1 - 3 |
| Feature Size |
16 x 16μm |
16 x 16μm |
13 x 13μm |
| Array Size |
17.4 x
13mm |
7.8 x
5.7mm |
8.9 x
6.5mm |
| Slide Size |
1 x 3 in. (25 x 76 mm) |
| Recommended Storage |
Desiccated at room temperature. |
| * Depending on transcriptome size. |
Arabidopsis thaliana
Source: TAIR
Build: TAIR 6.0
Accession Numbers: NC_003070, NC_003071, NC_003074, NC_003075, NC_003075 |
| Catalog Number |
Design Name |
Description |
Genes |
Probes/ Target |
Replicates |
| A4352001-00-01 |
Arabidopsis 60mer expr |
Arabidopsis thaliana 385K Array |
30,387 |
6 |
2 |
| A4511001-00-01 |
ATH6 60mer expr X4 |
Arabidopsis thaliana 4x72K Array |
30,361 |
2 |
1 |
| A7239-00-01 |
080924 AT6 expr HX12 |
Arabidopsis thaliana 12x135K Array |
30,380 |
4 |
1 |
Source: TAIR
Build: TAIR 8.0
Accession Numbers: NC_003070, NC_003071, NC_003074, NC_003075, NC_003075 |
| Catalog Number |
Design Name |
Description |
Genes |
Probes/ Target |
Replicates |
| A7239-00-02 |
080924 Atha EXP HX12 |
Arabidopsis thaliana 12x135K v2 Array |
34,236 |
4 |
1 |
Caenorhabditis elegans
Source: Wormbase
Build: WS160 |
| Catalog Number |
Design Name |
Description |
Genes |
Probes/ Target |
Replicates |
| A4354001-00-01 |
C elegans 60mer expr |
Caenorhabditis elegans 385K Array |
23,989 |
8 |
2 |
| A4510001-00-01 |
CE WS160 60mer expr X4 |
Caenorhabditis elegans 4x72K Array |
23,336 |
3 |
1 |
| A7237-00-01 |
080924 CEws160 expr HX12 |
Caenorhabditis elegans 12x135K Array |
23,945 |
5 |
1 |
Source: Wormbase
Build: WS190 |
| Catalog Number |
Design Name |
Description |
Genes |
Probes/ Target |
Replicates |
| A7237-00-02 |
080828 Cele EXP HX12 |
Caenorhabditis elegans 12x135K v2 Array |
23,187 |
6 |
1 |
Drosophila melanogaster
Source: Flybase
Build: DM4.3 |
| Catalog Number |
Design Name |
Description |
Genes |
Probes/ Target |
Replicates |
| A4351001-00-01 |
Drosophila 60mer expr |
Drosophila melanogaster 385K Array |
15,634 |
12 |
2 |
| A4509001-00-01 |
DM4 3 60mer expr X4 |
Drosophila melanogaster 4x72K Array |
15,473 |
4 |
1 |
| A7238-00-01 |
080924 DMr43 expr HX12 |
Drosophila melanogaster 12x135K Array |
15,595 |
8 |
1 |
Source: Flybase
Build: DM5.7 |
| Catalog Number |
Design Name |
Description |
Genes |
Probes/ Target |
Replicates |
| A7238-00-02 |
080813 Dmel exp HX12 |
Drosophila melanogaster 12x135K v2 Array |
16,637 |
8 |
1 |
Human
Source: NCBI
Build: HG18, Build 36 |
| Catalog Number |
Design Name |
Description |
Genes |
Probes/ Target |
Replicates |
| A4542-00-01 |
HG18 60mer expr |
Homo sapiens 385K Array |
47,633 |
8 |
1 |
| A4487001-00-01 |
HG18 60mer expr 4plex |
Homo sapiens 4x72K Array |
24,000 |
3 |
1 |
| A6484-00-01 |
070925 HG18 expr HX12 |
Homo sapiens 12x135K Array |
44,049 |
3 |
1 |
Mouse
Source: NCBI
Build: MM8 |
| Catalog Number |
Design Name |
Description |
Genes |
Probes/ Target |
Replicates |
| A4543-00-01 |
MM8 60mer expr |
Mus musculus 385K Array |
42,586 |
9 |
1 |
| A4486001-00-01 |
MM8 60mer expr X4 |
Mus musculus 4x72K Array |
18,869 |
3 |
1 |
| A6485-00-01 |
080925 mm8 60mer expr HX12 |
Mus musculus 12x135K Array |
42,576 |
3 |
1 |
Source: NCBI
Build: MM9 |
| Catalog Number |
Design Name |
Description |
Genes |
Probes/ Target |
Replicates |
| A6485-00-02 |
080924 MM9 EXP HX12 |
Mus musculus 12x135K v2 Array |
44,170 |
3 |
1 |
Rat
Source: Ensembl
Build: RGSC 3.4 |
| Catalog Number |
Design Name |
Description |
Genes |
Probes/ Target |
Replicates |
| A6184-00-01 |
2007-07-20 Rat X1 expr |
Rattus norvegicus 385K Array |
26,739 |
14 |
1 |
| A6185-00-01 |
2007-07-20 Rat X4 expr |
Rattus norvegicus 4x72K Array |
26,208 |
3 |
1 |
| A6486-00-01 |
080925 Rat HX12 expr HX12 |
Rattus norvegicus 12x135K Array |
26,419 |
5 |
1 |
Saccharomyces cerevisiae
Source: NCBI
Build: October 2003
Accession Numbers:NC_001133, NC_001134, NC_001135, NC_001136, NC_001137, NC_001138, NC_001139, NC_001140, NC_001141, NC_001142, NC_001143, NC_001144, NC_001145, NC_001146, NC_001147, NC_001148, NC_001224 |
| Catalog Number |
Design Name |
Description |
Genes |
Probes/ Target |
Replicates |
| A4345001-00-01 |
TI4932 60mer |
Saccharomyces cerevisiae 385K Array |
5,868 |
20 |
3 |
| A6186-00-01 |
TI4932 60mer expr X4 |
Saccharomyces cerevisiae 4x72K Array |
5,747 |
6 |
2 |
| A7236-00-01 |
080924 SC expr HX12 |
Saccharomyces cerevisiae 12x135K Array |
5,735 |
11 |
2 |
Source: NCBI
Build: June 2008
Accession Numbers:NC_001133, NC_001134, NC_001135, NC_001136, NC_001137, NC_001138, NC_001139, NC_001140, NC_001141, NC_001142, NC_001143, NC_001144, NC_001145, NC_001146, NC_001147, NC_001148, NC_001224 |
| Catalog Number |
Design Name |
Description |
Genes |
Probes/ Target |
Replicates |
| A7236-00-02 |
080828 Scer EXP HX12 |
Saccharomyces cerevisiae 12x135K v2 Array |
5,777 |
8 |
3 |
Schizosaccharomyces pombe
Source: NCBI
Build: June 2005
Accession Numbers: NC_003421, NC_003423, NC_003424 |
| Catalog Number |
Design Name |
Description |
Genes |
Probes/ Target |
Replicates |
| A4346001-00-01 |
TI4896 60mer |
Schizosaccharomyces pombe 385K Array |
5,040 |
19 |
4 |
| A6187-00-01 |
TI4896 60mer expr X4 |
Schizosaccharomyces pombe 4x72K Array |
4,997 |
7 |
2 |
| A7235-00-01 |
080924 SP expr HX12 |
Schizosaccharomyces pombe 12x135K Array |
4,976 |
12 |
2 |
Source: NCBI
Build: June 2008
Accession Numbers: NC_003421, NC_003423, NC_003424 |
| Catalog Number |
Design Name |
Description |
Genes |
Probes/ Target |
Replicates |
| A7235-00-02 |
080828 Spom EXP HX12 |
Schizosaccharomyces pombe 12x135K v2 Array |
4,942 |
9 |
3 |
Zebrafish New Design!
Source: Ensembl and UCSC
Build: Zv7 |
| Catalog Number |
Design Name |
Description |
Genes |
Probes/ Target |
Replicates |
| A7141-00-01 |
071105 Zv7 EXPR |
Danio rerio 385K Array |
37,157 |
12 |
1 |
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